BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013B11LP1|AL426480
(873 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1663 1719 0.0
>3x_Contig1663
Length = 13533
Score = 1719 bits (867), Expect = 0.0
Identities = 867/867 (100%)
Strand = Plus / Minus
Query: 7 ggatctttaatcttcaatcataaaaccatcatagaccatgagtgaaaaaaagcctctgcc 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5182 ggatctttaatcttcaatcataaaaccatcatagaccatgagtgaaaaaaagcctctgcc 5123
Query: 67 tcaaccgccgtttgaagaaaacacatgtaattatactaaagaggatgttagactcggtaa 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5122 tcaaccgccgtttgaagaaaacacatgtaattatactaaagaggatgttagactcggtaa 5063
Query: 127 gaaaacaaagcgcgatggcgatgacgctgatgatgaattcgaattctttcacgaatttca 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5062 gaaaacaaagcgcgatggcgatgacgctgatgatgaattcgaattctttcacgaatttca 5003
Query: 187 gagagaaaaggtgagatcattaattcatttgattaccaacgaactgaaattgaatggttt 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5002 gagagaaaaggtgagatcattaattcatttgattaccaacgaactgaaattgaatggttt 4943
Query: 247 tgaaacagaatatctgtttctgccatttagacctgagcaaactaatgaaaagcttttatc 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4942 tgaaacagaatatctgtttctgccatttagacctgagcaaactaatgaaaagcttttatc 4883
Query: 307 cttcttgaactcaatctttccgttaggtaatggccaacccgtagcggatgaaaagataca 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4882 cttcttgaactcaatctttccgttaggtaatggccaacccgtagcggatgaaaagataca 4823
Query: 367 aaaaatattaaacaggacagaagtctggactttgtttcaagctctaaaatatatatggtg 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4822 aaaaatattaaacaggacagaagtctggactttgtttcaagctctaaaatatatatggtg 4763
Query: 427 tcgattgccgaacggagaaataatcggatgggcagcatacaatgaatttaaaacgaagga 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4762 tcgattgccgaacggagaaataatcggatgggcagcatacaatgaatttaaaacgaagga 4703
Query: 487 ggctgaacagaattattctcaaaaatcttttcttgagattatgccaaaatgtttagattc 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4702 ggctgaacagaattattctcaaaaatcttttcttgagattatgccaaaatgtttagattc 4643
Query: 547 gcctaaccatgcatcaatagtatatgacttttttgatttaatagtcactatggcatctaa 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4642 gcctaaccatgcatcaatagtatatgacttttttgatttaatagtcactatggcatctaa 4583
Query: 607 ctcgaaaaagaataaaatgagcgctagaaagatatcaaagatgtgtgcagtatgggcatt 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4582 ctcgaaaaagaataaaatgagcgctagaaagatatcaaagatgtgtgcagtatgggcatt 4523
Query: 667 ccaaatggatcaagataccgctactaatatgatttttgatgccagacgggcagacactaa 726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4522 ccaaatggatcaagataccgctactaatatgatttttgatgccagacgggcagacactaa 4463
Query: 727 tgattataaacaaggtttgagccaatggattccggcagctgaggctatgtttcatttgtt 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4462 tgattataaacaaggtttgagccaatggattccggcagctgaggctatgtttcatttgtt 4403
Query: 787 attggctttcataagatcattcgtaccaacggattctacaaaggtaaaattaccgaaaag 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4402 attggctttcataagatcattcgtaccaacggattctacaaaggtaaaattaccgaaaag 4343
Query: 847 tttaagaaacattctattcgacaatgc 873
|||||||||||||||||||||||||||
Sbjct: 4342 tttaagaaacattctattcgacaatgc 4316
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7992
Number of Sequences: 1807
Number of extensions: 7992
Number of successful extensions: 61
Number of sequences better than 1.0e-20: 1
length of query: 873
length of database: 10,358,551
effective HSP length: 16
effective length of query: 857
effective length of database: 10,329,639
effective search space: 8852500623
effective search space used: 8852500623
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)